Gastrointestinal Mucosal Disruptions During ART-Treated SIV/Plasmodium fragile Co-Infection

Main Article Content

Sydney M. Nemphos
Hannah C. Green
James E. Prusak
Sallie L. Fell
Cecily Midkiff
Avelina Rodgers
Jillian Perret
Kelly Goff
Jordyn Miller
Megan Varnado
Kaitlin Didier
Natalie Valencia
Matilda J. Moström
Coty Tatum
Mary B. Barnes
Clara E. Krzykwa
Lori A. Rowe
Carolina Allers
Brooke Grasperge
Kristina De Paris
Nicholas J. Maness
Amitinder Kaur
Berlin Londono-Renteria
Robert V. Blair
Jennifer A. Manuzak

Abstract

Background: Human immunodeficiency virus (HIV) and Plasmodium spp., which causes malaria, are co-endemic. Previously, we showed that during antiretroviral therapy (ART)-treated simian immunodeficiency virus (SIV)/Plasmodium fragile co-infection, peripheral markers of neutrophil extracellular trap (NET) formation positively correlated with peripheral markers of disease and gastrointestinal (GI) dysfunction. However, the impact of co-infection directly in the GI mucosa is unclear. We hypothesized that ART-treated SIV/P. fragile co-infection would result in peripheral and GI immune disruption associated with exacerbated clinical manifestations of SIV and P. fragile.


Methods: Adult male rhesus macaques (RMs; n=6) were inoculated with SIVmac239, initiated ART at week 8 post-SIV infection (p.i.), were inoculated with P. fragile at week 12 p.i., and were followed until week 20 p.i. Plasma viral loads, peripheral parasitemia, and peripheral and GI immune cell frequencies and function were assessed longitudinally. 


Results: We observed significant CCR5+ CD4+ T cell decline in the periphery, colon, and duodenum following SIV infection. Neutrophil frequencies were unchanged throughout ART-treated SIV/P. fragile co-infection. Notably, duodenum NET-forming granulocyte frequencies were significantly positively associated with peripheral SIV burden following P. fragile co-infection but were unassociated with peripheral parasitemia and CD4+ T cell frequencies. Finally, although P. fragile was present in the duodenum, GI parasite burden was not associated with NET-forming granulocyte frequencies, peripheral viral loads, or CD4+ T cell frequencies. 


Conclusions: P. fragile co-infection during ART-treated SIV could cause mucosal disruptions that contribute to peripheral SIV replication despite ART. These data may have implications for HIV and malaria disease progression and treatment strategies.

Downloads

Download data is not yet available.

Article Details

Section
Articles

References

1. Hiv Data and Statistics 2023 Geneva, Switzerland: World Health Organization; 2023 [cited 2024 7/22/24]. Available from: https://www.who.int/teams/global-hiv-hepatitis-and-stis-programmes/hiv/strategic-information/hiv-data-and-statistics.

2. Tseng A, Seet J, Phillips EJ. The Evolution of Three Decades of Antiretroviral Therapy: Challenges, Triumphs and the Promise of the Future. Br J Clin Pharmacol. 2015;79(2):182-94. doi: 10.1111/bcp.12403. PubMed PMID: 24730660; PMCID: PMC4309625.

3. Holkmann Olsen C, Mocroft A, Kirk O, Vella S, Blaxhult A, Clumeck N, Fisher M, Katlama C, Phillips AN, Lundgren JD, Euro Ssg. Interruption of Combination Antiretroviral Therapy and Risk of Clinical Disease Progression to Aids or Death. HIV Med. 2007;8(2):96-104. doi: 10.1111/j.1468-1293.2007.00436.x. PubMed PMID: 17352766.

4. World Malaria Report 2023 Geneva, Switzerland: World Health Organization; 2023 [cited 2023 12/12/23]. Available from: https://www.who.int/publications/i/item/9789240086173.

5. Menard D, Dondorp A. Antimalarial Drug Resistance: A Threat to Malaria Elimination. Cold Spring Harb Perspect Med. 2017;7(7). doi: 10.1101/cshperspect.a025619. PubMed PMID: 28289248; PMCID: PMC5495053.

6. Mahittikorn A, Kotepui KU, De Jesus Milanez G, Masangkay FR, Kotepui M. A Meta-Analysis on the Prevalence and Characteristics of Severe Malaria in Patients with Plasmodium Spp. And Hiv Co-Infection. Sci Rep. 2021;11(1):16655. doi: 10.1038/s41598-021-95591-6. PubMed PMID: 34404814; PMCID: PMC8371128.

7. Abu-Raddad LJ, Patnaik P, Kublin JG. Dual Infection with Hiv and Malaria Fuels the Spread of Both Diseases in Sub-Saharan Africa. Science. 2006;314(5805):1603-6. doi: 10.1126/science.1132338. PubMed PMID: 17158329.

8. Ariyoshi K, Schim van der Loeff M, Berry N, Jaffar S, Whittle H. Plasma Hiv Viral Load in Relation to Season and to Plasmodium Falciparum Parasitaemia. AIDS. 1999;13(9):1145-6. doi: 10.1097/00002030-199906180-00023. PubMed PMID: 10397550.

9. Berg A, Patel S, Aukrust P, David C, Gonca M, Berg ES, Dalen I, Langeland N. Increased Severity and Mortality in Adults Co-Infected with Malaria and Hiv in Maputo, Mozambique: A Prospective Cross-Sectional Study. PLoS One. 2014;9(2):e88257. doi: 10.1371/journal.pone.0088257. PubMed PMID: 24505451; PMCID: PMC3914956.

10. Cuadros DF, Branscum AJ, Crowley PH. Hiv-Malaria Co-Infection: Effects of Malaria on the Prevalence of Hiv in East Sub-Saharan Africa. Int J Epidemiol. 2011;40(4):931-9. doi: 10.1093/ije/dyq256. PubMed PMID: 21224274.

11. Hoffman IF, Jere CS, Taylor TE, Munthali P, Dyer JR, Wirima JJ, Rogerson SJ, Kumwenda N, Eron JJ, Fiscus SA, Chakraborty H, Taha TE, Cohen MS, Molyneux ME. The Effect of Plasmodium Falciparum Malaria on Hiv-1 Rna Blood Plasma Concentration. AIDS. 1999;13(4):487-94. doi: 10.1097/00002030-199903110-00007. PubMed PMID: 10197377.

12. Kublin JG, Patnaik P, Jere CS, Miller WC, Hoffman IF, Chimbiya N, Pendame R, Taylor TE, Molyneux ME. Effect of Plasmodium Falciparum Malaria on Concentration of Hiv-1-Rna in the Blood of Adults in Rural Malawi: A Prospective Cohort Study. Lancet. 2005;365(9455):233-40. doi: 10.1016/S0140-6736(05)17743-5. PubMed PMID: 15652606.

13. Tay SC, Badu K, Mensah AA, Gbedema SY. The Prevalence of Malaria among Hiv Seropositive Individuals and the Impact of the Co- Infection on Their Hemoglobin Levels. Ann Clin Microbiol Antimicrob. 2015;14:10. doi: 10.1186/s12941-015-0064-6. PubMed PMID: 25857950; PMCID: PMC4355357.

14. Deeks SG, Tracy R, Douek DC. Systemic Effects of Inflammation on Health during Chronic Hiv Infection. Immunity. 2013;39(4):633-45. doi: 10.1016/j.immuni.2013.10.001. PubMed PMID: 24138880; PMCID: PMC4012895.

15. Popa GL, Popa MI. Recent Advances in Understanding the Inflammatory Response in Malaria: A Review of the Dual Role of Cytokines. J Immunol Res. 2021;2021:7785180. doi: 10.1155/2021/7785180. PubMed PMID: 34790829; PMCID: PMC8592744.

16. Lv T, Cao W, Li T. Hiv-Related Immune Activation and Inflammation: Current Understanding and Strategies. J Immunol Res. 2021;2021:7316456. doi: 10.1155/2021/7316456. PubMed PMID: 34631899; PMCID: PMC8494587.

17. Hunt PW. Very Early Art and Persistent Inflammation in Treated Hiv. Clin Infect Dis. 2017;64(2):132-3. doi: 10.1093/cid/ciw697. PubMed PMID: 27965300; PMCID: PMC5215217.

18. Stanisic DI, Good MF. Malaria Vaccines: Progress to Date. BioDrugs. 2023;37(6):737-56. doi: 10.1007/s40259-023-00623-4. PubMed PMID: 37728713; PMCID: PMC10581939.

19. Sadowski I, Hashemi FB. Strategies to Eradicate Hiv from Infected Patients: Elimination of Latent Provirus Reservoirs. Cell Mol Life Sci. 2019;76(18):3583-600. doi: 10.1007/s00018-019-03156-8. PubMed PMID: 31129856; PMCID: PMC6697715.

20. Sender R, Weiss Y, Navon Y, Milo I, Azulay N, Keren L, Fuchs S, Ben-Zvi D, Noor E, Milo R. The Total Mass, Number, and Distribution of Immune Cells in the Human Body. Proc Natl Acad Sci U S A. 2023;120(44):e2308511120. doi: 10.1073/pnas.2308511120. PubMed PMID: 37871201; PMCID: PMC10623016.

21. Hunt PW, Sinclair E, Rodriguez B, Shive C, Clagett B, Funderburg N, Robinson J, Huang Y, Epling L, Martin JN, Deeks SG, Meinert CL, Van Natta ML, Jabs DA, Lederman MM. Gut Epithelial Barrier Dysfunction and Innate Immune Activation Predict Mortality in Treated Hiv Infection. J Infect Dis. 2014;210(8):1228-38. doi: 10.1093/infdis/jiu238. PubMed PMID: 24755434; PMCID: PMC4192038.

22. Klatt NR, Funderburg NT, Brenchley JM. Microbial Translocation, Immune Activation, and Hiv Disease. Trends Microbiol. 2013;21(1):6-13. doi: 10.1016/j.tim.2012.09.001. PubMed PMID: 23062765; PMCID: PMC3534808.

23. Sandler NG, Wand H, Roque A, Law M, Nason MC, Nixon DE, Pedersen C, Ruxrungtham K, Lewin SR, Emery S, Neaton JD, Brenchley JM, Deeks SG, Sereti I, Douek DC, Group ISS. Plasma Levels of Soluble Cd14 Independently Predict Mortality in Hiv Infection. J Infect Dis. 2011;203(6):780-90. doi: 10.1093/infdis/jiq118. PubMed PMID: 21252259; PMCID: PMC3071127.

24. Alzahrani J, Hussain T, Simar D, Palchaudhuri R, Abdel-Mohsen M, Crowe SM, Mbogo GW, Palmer CS. Inflammatory and Immunometabolic Consequences of Gut Dysfunction in Hiv: Parallels with Ibd and Implications for Reservoir Persistence and Non-Aids Comorbidities. EBioMedicine. 2019;46:522-31. doi: 10.1016/j.ebiom.2019.07.027. PubMed PMID: 31327693; PMCID: PMC6710907.

25. Moretti S, Schietroma I, Sberna G, Maggiorella MT, Sernicola L, Farcomeni S, Giovanetti M, Ciccozzi M, Borsetti A. Hiv-1-Host Interaction in Gut-Associated Lymphoid Tissue (Galt): Effects on Local Environment and Comorbidities. Int J Mol Sci. 2023;24(15). doi: 10.3390/ijms241512193. PubMed PMID: 37569570; PMCID: PMC10418605.

26. Melmed G, Thomas LS, Lee N, Tesfay SY, Lukasek K, Michelsen KS, Zhou Y, Hu B, Arditi M, Abreu MT. Human Intestinal Epithelial Cells Are Broadly Unresponsive to Toll-Like Receptor 2-Dependent Bacterial Ligands: Implications for Host-Microbial Interactions in the Gut. J Immunol. 2003;170(3):1406-15. doi: 10.4049/jimmunol.170.3.1406. PubMed PMID: 12538701.

27. Li SX, Armstrong A, Neff CP, Shaffer M, Lozupone CA, Palmer BE. Complexities of Gut Microbiome Dysbiosis in the Context of Hiv Infection and Antiretroviral Therapy. Clin Pharmacol Ther. 2016;99(6):600-11. doi: 10.1002/cpt.363. PubMed PMID: 26940481; PMCID: PMC4927263.

28. Villanueva-Millan MJ, Perez-Matute P, Recio-Fernandez E, Lezana Rosales JM, Oteo JA. Differential Effects of Antiretrovirals on Microbial Translocation and Gut Microbiota Composition of Hiv-Infected Patients. J Int AIDS Soc. 2017;20(1):21526. doi: 10.7448/IAS.20.1.21526. PubMed PMID: 28362071; PMCID: PMC5467634.

29. Donnelly E, de Water JV, Luckhart S. Malaria-Induced Bacteremia as a Consequence of Multiple Parasite Survival Strategies. Curr Res Microb Sci. 2021;2:100036. doi: 10.1016/j.crmicr.2021.100036. PubMed PMID: 34841327; PMCID: PMC8610325.

30. Olsson RA, Johnston EH. Histopathologic Changes and Small-Bowel Absorption in Falciparum Malaria. Am J Trop Med Hyg. 1969;18(3):355-9. doi: 10.4269/ajtmh.1969.18.355. PubMed PMID: 4889829.

31. Wilairatana P, Meddings JB, Ho M, Vannaphan S, Looareesuwan S. Increased Gastrointestinal Permeability in Patients with Plasmodium Falciparum Malaria. Clin Infect Dis. 1997;24(3):430-5. doi: 10.1093/clinids/24.3.430. PubMed PMID: 9114195.

32. Gardner MB CM, Luciw PA. . Aids and Other Manifestations of Hiv Infection. 4th ed ed. GP W, editor. New York: Raven Press; 2004.

33. Estes JD, Harris LD, Klatt NR, Tabb B, Pittaluga S, Paiardini M, Barclay GR, Smedley J, Pung R, Oliveira KM, Hirsch VM, Silvestri G, Douek DC, Miller CJ, Haase AT, Lifson J, Brenchley JM. Damaged Intestinal Epithelial Integrity Linked to Microbial Translocation in Pathogenic Simian Immunodeficiency Virus Infections. PLoS Pathog. 2010;6(8):e1001052. doi: 10.1371/journal.ppat.1001052. PubMed PMID: 20808901; PMCID: PMC2924359.

34. Hensley-McBain T, Wu MC, Manuzak JA, Cheu RK, Gustin A, Driscoll CB, Zevin AS, Miller CJ, Coronado E, Smith E, Chang J, Gale M, Jr., Somsouk M, Burgener AD, Hunt PW, Hope TJ, Collier AC, Klatt NR. Increased Mucosal Neutrophil Survival Is Associated with Altered Microbiota in Hiv Infection. PLoS Pathog. 2019;15(4):e1007672. doi: 10.1371/journal.ppat.1007672. PubMed PMID: 30973942; PMCID: PMC6459500.

35. Somsouk M, Estes JD, Deleage C, Dunham RM, Albright R, Inadomi JM, Martin JN, Deeks SG, McCune JM, Hunt PW. Gut Epithelial Barrier and Systemic Inflammation during Chronic Hiv Infection. AIDS. 2015;29(1):43-51. doi: 10.1097/QAD.0000000000000511. PubMed PMID: 25387317; PMCID: PMC4444362.

36. Coatney GR CW, Contacos PG. The Primate Malarias. Washington DC: US National Institute of Allergy and Infectious Diseases; 1971.

37. Nemphos SM, Green HC, Prusak JE, Fell SL, Goff K, Varnado M, Didier K, Guy N, Mostrom MJ, Tatum C, Massey C, Barnes MB, Rowe LA, Allers C, Blair RV, Embers ME, Maness NJ, Marx PA, Grasperge B, Kaur A, De Paris K, Shaffer JG, Hensley-McBain T, Londono-Renteria B, Manuzak JA. Elevated Inflammation Associated with Markers of Neutrophil Function and Gastrointestinal Disruption in Pilot Study of Plasmodium Fragile Co-Infection of Art-Treated Sivmac239+ Rhesus Macaques. Viruses. 2024;16(7). doi: 10.3390/v16071036. PubMed PMID: 39066199; PMCID: PMC11281461.

38. Loffredo JT, Maxwell J, Qi Y, Glidden CE, Borchardt GJ, Soma T, Bean AT, Beal DR, Wilson NA, Rehrauer WM, Lifson JD, Carrington M, Watkins DI. Mamu-B*08-Positive Macaques Control Simian Immunodeficiency Virus Replication. J Virol. 2007;81(16):8827-32. doi: 10.1128/JVI.00895-07. PubMed PMID: 17537848; PMCID: PMC1951344.

39. Mothe BR, Weinfurter J, Wang C, Rehrauer W, Wilson N, Allen TM, Allison DB, Watkins DI. Expression of the Major Histocompatibility Complex Class I Molecule Mamu-a*01 Is Associated with Control of Simian Immunodeficiency Virus Sivmac239 Replication. J Virol. 2003;77(4):2736-40. doi: 10.1128/jvi.77.4.2736-2740.2003. PubMed PMID: 12552014; PMCID: PMC141082.

40. Yant LJ, Friedrich TC, Johnson RC, May GE, Maness NJ, Enz AM, Lifson JD, O’Connor DH, Carrington M, Watkins DI. The High-Frequency Major Histocompatibility Complex Class I Allele Mamu-B*17 Is Associated with Control of Simian Immunodeficiency Virus Sivmac239 Replication. J Virol. 2006;80(10):5074-7. doi: 10.1128/JVI.80.10.5074-5077.2006. PubMed PMID: 16641299; PMCID: PMC1472056.

41. Del Prete GQ, Scarlotta M, Newman L, Reid C, Parodi LM, Roser JD, Oswald K, Marx PA, Miller CJ, Desrosiers RC, Barouch DH, Pal R, Piatak M, Jr., Chertova E, Giavedoni LD, O’Connor DH, Lifson JD, Keele BF. Comparative Characterization of Transfection- and Infection-Derived Simian Immunodeficiency Virus Challenge Stocks for in Vivo Nonhuman Primate Studies. J Virol. 2013;87(8):4584-95. doi: 10.1128/JVI.03507-12. PubMed PMID: 23408608; PMCID: PMC3624367.

42. Monjure CJ, Tatum CD, Panganiban AT, Arainga M, Traina-Dorge V, Marx PA, Jr., Didier ES. Optimization of Pcr for Quantification of Simian Immunodeficiency Virus Genomic Rna in Plasma of Rhesus Macaques (Macaca Mulatta) Using Armored Rna. J Med Primatol. 2014;43(1):31-43. doi: 10.1111/jmp.12088. PubMed PMID: 24266615; PMCID: PMC3891828.

43. Del Prete GQ, Smedley J, Macallister R, Jones GS, Li B, Hattersley J, Zheng J, Piatak M, Jr., Keele BF, Hesselgesser J, Geleziunas R, Lifson JD. Short Communication: Comparative Evaluation of Coformulated Injectable Combination Antiretroviral Therapy Regimens in Simian Immunodeficiency Virus-Infected Rhesus Macaques. AIDS Res Hum Retroviruses. 2016;32(2):163-8. doi: 10.1089/AID.2015.0130. PubMed PMID: 26150024; PMCID: PMC4761795.

44. Casimiro DR, Cox K, Tang A, Sykes KJ, Feng M, Wang F, Bett A, Schleif WA, Liang X, Flynn J, Tobery TW, Wilson K, Finnefrock A, Huang L, Vitelli S, Lin J, Patel D, Davies ME, Heidecker GJ, Freed DC, Dubey S, O’Connor DH, Watkins DI, Zhang ZQ, Shiver JW. Efficacy of Multivalent Adenovirus-Based Vaccine against Simian Immunodeficiency Virus Challenge. J Virol. 2010;84(6):2996-3003. doi: 10.1128/JVI.00969-09. PubMed PMID: 20042509; PMCID: PMC2826028.

45. Casimiro DR, Wang F, Schleif WA, Liang X, Zhang ZQ, Tobery TW, Davies ME, McDermott AB, O’Connor DH, Fridman A, Bagchi A, Tussey LG, Bett AJ, Finnefrock AC, Fu TM, Tang A, Wilson KA, Chen M, Perry HC, Heidecker GJ, Freed DC, Carella A, Punt KS, Sykes KJ, Huang L, Ausensi VI, Bachinsky M, Sadasivan-Nair U, Watkins DI, Emini EA, Shiver JW. Attenuation of Simian Immunodeficiency Virus Sivmac239 Infection by Prophylactic Immunization with Dna and Recombinant Adenoviral Vaccine Vectors Expressing Gag. J Virol. 2005;79(24):15547-55. doi: 10.1128/JVI.79.24.15547-15555.2005. PubMed PMID: 16306625; PMCID: PMC1315991.

46. Fennessey CM, Reid C, Lipkey L, Newman L, Oswald K, Piatak M, Jr., Roser JD, Chertova E, Smedley J, Gregory Alvord W, Del Prete GQ, Estes JD, Lifson JD, Keele BF. Generation and Characterization of a Sivmac239 Clone Corrected at Four Suboptimal Nucleotides. Retrovirology. 2015;12:49. doi: 10.1186/s12977-015-0175-3. PubMed PMID: 26076651; PMCID: PMC4469405.

47. Beesham I, Issema R, Palanee-Phillips T, Onono M, Evans S, Beksinska M, Ahmed K, Kasaro MP, Batting J, Deese J, Dlamini L, Yankurije B, Thomas KK, Heffron R, Consortium ET. Art Initiation among Women Newly Diagnosed with Hiv in a Contraceptive Trial in Sub-Saharan Africa. AIDS Care. 2022;34(4):478-85. doi: 10.1080/09540121.2021.1944601. PubMed PMID: 34180277.

48. Vogt F, Rehman AM, Kranzer K, Nyathi M, Van Griensven J, Dixon M, Ndebele W, Gunguwo H, Colebunders R, Ndlovu M, Apollo T, Ferrand RA. Relationship between Time to Initiation of Antiretroviral Therapy and Treatment Outcomes: A Cohort Analysis of Art Eligible Adolescents in Zimbabwe. J Acquir Immune Defic Syndr. 2017;74(4):390-8. doi: 10.1097/QAI.0000000000001274. PubMed PMID: 28002183; PMCID: PMC5321111.

49. Collins WE, Warren M, Sullivan JS, Galland GG, Strobert E, Nace D, Williams A, Williams T, Barnwell JW. Studies on Sporozoite-Induced and Chronic Infections with Plasmodium Fragile in Macaca Mulatta and New World Monkeys. J Parasitol. 2006;92(5):1019-26. doi: 10.1645/GE-848R.1. PubMed PMID: 17152944.

50. Dissanaike A, Nelson P, Garnham P. Two New Malaria Parasites Plasmodium Cynomolgi Ceylonensis Subsp. Nov. And Plasmodium Fragile Sp. Nov. From Monkeys in Ceylon1965.

51. Moll K KA, Scherf A, Wahlgren M. Methods in Malaria Researcb. 6th ed ed. Glasgow, UK & Manassas VA, USA: EviMalaR; 2013.

52. Trott KA, Chau JY, Hudgens MG, Fine J, Mfalila CK, Tarara RP, Collins WE, Sullivan J, Luckhart S, Abel K. Evidence for an Increased Risk of Transmission of Simian Immunodeficiency Virus and Malaria in a Rhesus Macaque Coinfection Model. J Virol. 2011;85(22):11655-63. doi: 10.1128/JVI.05644-11. PubMed PMID: 21917966; PMCID: PMC3209294.

53. Trott KA, Richardson A, Hudgens MA, Abel K. Immune Activation and Regulation in Simian Immunodeficiency Virus-Plasmodium Fragile-Coinfected Rhesus Macaques. J Virol. 2013;87(17):9523-37. doi: 10.1128/JVI.00861-13. PubMed PMID: 23785209; PMCID: PMC3754117.

54. Felger I, Maire M, Bretscher MT, Falk N, Tiaden A, Sama W, Beck HP, Owusu-Agyei S, Smith TA. The Dynamics of Natural Plasmodium Falciparum Infections. PLoS One. 2012;7(9):e45542. doi: 10.1371/journal.pone.0045542. PubMed PMID: 23029082; PMCID: PMC3445515.

55. Lindblade KA, Steinhardt L, Samuels A, Kachur SP, Slutsker L. The Silent Threat: Asymptomatic Parasitemia and Malaria Transmission. Expert Rev Anti Infect Ther. 2013;11(6):623-39. doi: 10.1586/eri.13.45. PubMed PMID: 23750733.

56. Manuzak JA, Hensley-McBain T, Zevin AS, Miller C, Cubas R, Agricola B, Gile J, Richert-Spuhler L, Patilea G, Estes JD, Langevin S, Reeves RK, Haddad EK, Klatt NR. Enhancement of Microbiota in Healthy Macaques Results in Beneficial Modulation of Mucosal and Systemic Immune Function. J Immunol. 2016;196(5):2401-9. doi: 10.4049/jimmunol.1502470. PubMed PMID: 26826246; PMCID: PMC4761491.

57. Bar KJ, Coronado E, Hensley-McBain T, O’Connor MA, Osborn JM, Miller C, Gott TM, Wangari S, Iwayama N, Ahrens CY, Smedley J, Moats C, Lynch RM, Haddad EK, Haigwood NL, Fuller DH, Shaw GM, Klatt NR, Manuzak JA. Simian-Human Immunodeficiency Virus Shiv.Ch505 Infection of Rhesus Macaques Results in Persistent Viral Replication and Induces Intestinal Immunopathology. J Virol. 2019;93(18). doi: 10.1128/JVI.00372-19. PubMed PMID: 31217249; PMCID: PMC6714786.

58. Prusak JE, Nemphos SM, Green HC, Fell SL, Midkiff CC, Rodgers A, Perret J, Grasperge B, Vail K, Minkah N, Wilder B, Londono-Renteria B, Blair RV, Manuzak JA. Clinical and Pathological Outcomes of Experimental Plasmodium Fragile Infection in a Rhesus Macaque. Am J Trop Med Hyg. 2025;113(6):1229-34. doi: 10.4269/ajtmh.25-0222. PubMed PMID: 41056920; PMCID: PMC12676641.

59. White NJ. Anaemia and Malaria. Malar J. 2018;17(1):371. doi: 10.1186/s12936-018-2509-9. PubMed PMID: 30340592; PMCID: PMC6194647.

60. Trampuz A, Jereb M, Muzlovic I, Prabhu RM. Clinical Review: Severe Malaria. Crit Care. 2003;7(4):315-23. doi: 10.1186/cc2183. PubMed PMID: 12930555; PMCID: PMC270697.

61. Abioye AI, Andersen CT, Sudfeld CR, Fawzi WW. Anemia, Iron Status, and Hiv: A Systematic Review of the Evidence. Adv Nutr. 2020;11(5):1334-63. doi: 10.1093/advances/nmaa037. PubMed PMID: 32383731; PMCID: PMC7490171.

62. Volberding PA, Levine AM, Dieterich D, Mildvan D, Mitsuyasu R, Saag M, Anemia in HIVWG. Anemia in Hiv Infection: Clinical Impact and Evidence-Based Management Strategies. Clin Infect Dis. 2004;38(10):1454-63. doi: 10.1086/383031. PubMed PMID: 15156485.

63. Haldar K, Mohandas N. Malaria, Erythrocytic Infection, and Anemia. Hematology Am Soc Hematol Educ Program. 2009:87-93. doi: 10.1182/asheducation-2009.1.87. PubMed PMID: 20008186; PMCID: PMC2933134.

64. Elkhalifa AME, Abdul-Ghani R, Tamomh AG, Eltaher NE, Ali NY, Ali MM, Bazie EA, KhirAlla A, DfaAlla FA, Alhasan OAM. Hematological Indices and Abnormalities among Patients with Uncomplicated Falciparum Malaria in Kosti City of the White Nile State, Sudan: A Comparative Study. BMC Infect Dis. 2021;21(1):507. doi: 10.1186/s12879-021-06228-y. PubMed PMID: 34059017; PMCID: PMC8166086.

65. Kotepui M, Piwkham D, PhunPhuech B, Phiwklam N, Chupeerach C, Duangmano S. Effects of Malaria Parasite Density on Blood Cell Parameters. PLoS One. 2015;10(3):e0121057. doi: 10.1371/journal.pone.0121057. PubMed PMID: 25807235; PMCID: PMC4373695.

66. Veazey RS, Mansfield KG, Tham IC, Carville AC, Shvetz DE, Forand AE, Lackner AA. Dynamics of Ccr5 Expression by Cd4(+) T Cells in Lymphoid Tissues during Simian Immunodeficiency Virus Infection. J Virol. 2000;74(23):11001-7. doi: 10.1128/jvi.74.23.11001-11007.2000. PubMed PMID: 11069995; PMCID: PMC113180.

67. Fell SL, Nemphos SM, Prusak JE, Green HC, Miller J, Rowan SQ, Valencia N, Tatum C, Barnes MB, Allers C, Scheuermann S, Goff K, Krzykwa C, Rowe LA, Maness NJ, Mostrom MJ, Hensley-McBain T, Doyle-Meyers L, Kaur A, Manuzak JA. Inflammatory Neutrophil Responses and T Cell Activation in Art-Treated Sivmac239-Infected Rhesus Macaques. J Immunol. 2025;214(9):2307-24. doi: 10.1093/jimmun/vkaf100. PubMed PMID: 40504034; PMCID: PMC12481039.

68. Finzi D, Blankson J, Siliciano JD, Margolick JB, Chadwick K, Pierson T, Smith K, Lisziewicz J, Lori F, Flexner C, Quinn TC, Chaisson RE, Rosenberg E, Walker B, Gange S, Gallant J, Siliciano RF. Latent Infection of Cd4+ T Cells Provides a Mechanism for Lifelong Persistence of Hiv-1, Even in Patients on Effective Combination Therapy. Nat Med. 1999;5(5):512-7. doi: 10.1038/8394. PubMed PMID: 10229227.

69. Joya C, Won SH, Schofield C, Lalani T, Maves RC, Kronmann K, Deiss R, Okulicz J, Agan BK, Ganesan A. Persistent Low-Level Viremia While on Antiretroviral Therapy Is an Independent Risk Factor for Virologic Failure. Clin Infect Dis. 2019;69(12):2145-52. doi: 10.1093/cid/ciz129. PubMed PMID: 30785191; PMCID: PMC6880328.

70. Crespo-Bermejo C, de Arellano ER, Lara-Aguilar V, Valle-Millares D, Gomez-Lus ML, Madrid R, Martin-Carbonero L, Briz V. Persistent Low-Level Viremia in Persons Living with Hiv Undertreatment: An Unresolved Status. Virulence. 2021;12(1):2919-31. doi: 10.1080/21505594.2021.2004743. PubMed PMID: 34874239; PMCID: PMC8654475.

71. Wang X, Rasmussen T, Pahar B, Poonia B, Alvarez X, Lackner AA, Veazey RS. Massive Infection and Loss of Cd4+ T Cells Occurs in the Intestinal Tract of Neonatal Rhesus Macaques in Acute Siv Infection. Blood. 2007;109(3):1174-81. doi: 10.1182/blood-2006-04-015172. PubMed PMID: 17047153; PMCID: PMC1785148.

72. Allers K, Puyskens A, Epple HJ, Schurmann D, Hofmann J, Moos V, Schneider T. The Effect of Timing of Antiretroviral Therapy on Cd4+ T-Cell Reconstitution in the Intestine of Hiv-Infected Patients. Mucosal Immunol. 2016;9(1):265-74. doi: 10.1038/mi.2015.58. PubMed PMID: 26129649.

73. Brenchley JM, Schacker TW, Ruff LE, Price DA, Taylor JH, Beilman GJ, Nguyen PL, Khoruts A, Larson M, Haase AT, Douek DC. Cd4+ T Cell Depletion during All Stages of Hiv Disease Occurs Predominantly in the Gastrointestinal Tract. J Exp Med. 2004;200(6):749-59. doi: 10.1084/jem.20040874. PubMed PMID: 15365096; PMCID: PMC2211962.

74. Liu G, Qin L, Li Y, Zhao S, Shugay M, Yan Y, Ye Y, Chen Y, Huang C, Bayaer N, Adah D, Zhang H, Su Z, Chen X. Subsequent Malaria Enhances Virus-Specific T Cell Immunity in Siv-Infected Chinese Rhesus Macaques. Cell Commun Signal. 2022;20(1):101. doi: 10.1186/s12964-022-00910-7. PubMed PMID: 35778766; PMCID: PMC9248186.

75. Koehler JW, Bolton M, Rollins A, Snook K, deHaro E, Henson E, Rogers L, Martin LN, Krogstad DJ, James MA, Rice J, Davison B, Veazey RS, Prabhu R, Amedee AM, Garry RF, Cogswell FB. Altered Immune Responses in Rhesus Macaques Co-Infected with Siv and Plasmodium Cynomolgi: An Animal Model for Coincident Aids and Relapsing Malaria. PLOS ONE. 2009;4(9):e7139. doi: 10.1371/journal.pone.0007139.

76. Brinkmann V, Reichard U, Goosmann C, Fauler B, Uhlemann Y, Weiss DS, Weinrauch Y, Zychlinsky A. Neutrophil Extracellular Traps Kill Bacteria. Science. 2004;303(5663):1532-5. doi: 10.1126/science.1092385. PubMed PMID: 15001782.

77. Hager M, Cowland JB, Borregaard N. Neutrophil Granules in Health and Disease. J Intern Med. 2010;268(1):25-34. doi: 10.1111/j.1365-2796.2010.02237.x. PubMed PMID: 20497300.

78. Borregaard N, Cowland JB. Granules of the Human Neutrophilic Polymorphonuclear Leukocyte. Blood. 1997;89(10):3503-21. PubMed PMID: 9160655.

79. Nathan C. Neutrophils and Immunity: Challenges and Opportunities. Nat Rev Immunol. 2006;6(3):173-82. doi: 10.1038/nri1785. PubMed PMID: 16498448.

80. Tannous S, Ghanem E. A Bite to Fight: Front-Line Innate Immune Defenses against Malaria Parasites. Pathog Glob Health. 2018;112(1):1-12. doi: 10.1080/20477724.2018.1429847. PubMed PMID: 29376476; PMCID: PMC6056835.

81. Schonrich G, Raftery MJ. Neutrophil Extracellular Traps Go Viral. Front Immunol. 2016;7:366. doi: 10.3389/fimmu.2016.00366. PubMed PMID: 27698656; PMCID: PMC5027205.

82. Saitoh T, Komano J, Saitoh Y, Misawa T, Takahama M, Kozaki T, Uehata T, Iwasaki H, Omori H, Yamaoka S, Yamamoto N, Akira S. Neutrophil Extracellular Traps Mediate a Host Defense Response to Human Immunodeficiency Virus-1. Cell Host Microbe. 2012;12(1):109-16. doi: 10.1016/j.chom.2012.05.015. PubMed PMID: 22817992.

83. Elbim C, Prevot MH, Bouscarat F, Franzini E, Chollet-Martin S, Hakim J, Gougerot-Pocidalo MA. Polymorphonuclear Neutrophils from Human Immunodeficiency Virus-Infected Patients Show Enhanced Activation, Diminished Fmlp-Induced L-Selectin Shedding, and an Impaired Oxidative Burst after Cytokine Priming. Blood. 1994;84(8):2759-66. PubMed PMID: 7522641.

84. Ramsuran V, Kulkarni H, He W, Mlisana K, Wright EJ, Werner L, Castiblanco J, Dhanda R, Le T, Dolan MJ, Guan W, Weiss RA, Clark RA, Karim SS, Ahuja SK, Ndung’u T. Duffy-Null-Associated Low Neutrophil Counts Influence Hiv-1 Susceptibility in High-Risk South African Black Women. Clin Infect Dis. 2011;52(10):1248-56. doi: 10.1093/cid/cir119. PubMed PMID: 21507922; PMCID: PMC3115278.

85. Baker VS, Imade GE, Molta NB, Tawde P, Pam SD, Obadofin MO, Sagay SA, Egah DZ, Iya D, Afolabi BB, Baker M, Ford K, Ford R, Roux KH, Keller TC, 3rd. Cytokine-Associated Neutrophil Extracellular Traps and Antinuclear Antibodies in Plasmodium Falciparum Infected Children under Six Years of Age. Malar J. 2008;7:41. doi: 10.1186/1475-2875-7-41. PubMed PMID: 18312656; PMCID: PMC2275287.

86. Knackstedt SL, Georgiadou A, Apel F, Abu-Abed U, Moxon CA, Cunnington AJ, Raupach B, Cunningham D, Langhorne J, Kruger R, Barrera V, Harding SP, Berg A, Patel S, Otterdal K, Mordmuller B, Schwarzer E, Brinkmann V, Zychlinsky A, Amulic B. Neutrophil Extracellular Traps Drive Inflammatory Pathogenesis in Malaria. Sci Immunol. 2019;4(40). doi: 10.1126/sciimmunol.aaw0336. PubMed PMID: 31628160; PMCID: PMC6892640.

87. Kho S, Minigo G, Andries B, Leonardo L, Prayoga P, Poespoprodjo JR, Kenangalem E, Price RN, Woodberry T, Anstey NM, Yeo TW. Circulating Neutrophil Extracellular Traps and Neutrophil Activation Are Increased in Proportion to Disease Severity in Human Malaria. J Infect Dis. 2019;219(12):1994-2004. doi: 10.1093/infdis/jiy661. PubMed PMID: 30452670; PMCID: PMC6542661.

88. White MT, Karl S, Koepfli C, Longley RJ, Hofmann NE, Wampfler R, Felger I, Smith T, Nguitragool W, Sattabongkot J, Robinson L, Ghani A, Mueller I. Plasmodium Vivax and Plasmodium Falciparum Infection Dynamics: Re-Infections, Recrudescences and Relapses. Malar J. 2018;17(1):170. doi: 10.1186/s12936-018-2318-1 PubMed PMID: 29665803; PMCID: PMC5905131.